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Running your app within Jupyter

It is likely that you will want to preview and test your app before you deploy it. However because of security implications we cannot allow arbritrary ports to be opened. Instead, you have to use the /\_tunnel\_/ endpoint we have provided.

Currently the only supported port is 8050, so the url of your app will be /\_tunnel\_/8050/

A few things to bear in mind - You can only run one app on the 8050 port at a time. - Your app, by default will only respond to 127.0.0.1 which will not work with the tunnel. You should make sure it responds to 0.0.0.0 instead. - The base URL of your app will need to be set (while in Jupyter development) to be /\_tunnel\_/8050/ (see the dash walkthrough below for an example) - Only you will be able to access this url.

In the old system there was support for a range of ports, so it is possible you may not be using 8050 in existing code. Please update your code accordingly.

Running Plotly Dash apps

See Coffee and Coding session on Building webapps in Python using Plotly Dash

Jupyter Lab Version

Dash is known to work with JupyterLab: 3.1.13, Python 3.9 - Git ext. You may run into issues attempting to run Dash with other versions of JupyterLab.

Install dependencies

In the terminal, install the Dash dependencies:

pip install --user dash==2.17.1  # The core dash backend
pip install --user dash-daq==0.5.0  # DAQ components (newly open-sourced!)

The demo code in this document is known to work with these versions but you can install any version you like for your own code.

If you are planning on turning this into a project, you’ll need to manage your dependencies by adding these to either requirements.txt and pip or environment.yaml and conda.

Example code

Save the Dash hello world app to a new python file called app.py:

N.B. You will need to have pandas installed for this code to work.

import dash
from dash.dependencies import Input, Output
from dash import dcc
from dash import html


import flask
import pandas as pd
import time
import os


server = flask.Flask('app')
server.secret_key = os.environ.get('secret_key', 'secret')


df = pd.read_csv('https://raw.githubusercontent.com/plotly/datasets/master/hello-world-stock.csv')


external_scripts = [
    'https://cdn.plot.ly/plotly-basic-latest.min.js'
]


app = dash.Dash('app', server=server, url_base_pathname='/tunnel/8050/', external_scripts=external_scripts)


app.scripts.config.serve_locally = False


app.layout = html.Div([
    html.H1('Stock Tickers'),
    dcc.Dropdown(
        id='my-dropdown',
        options=[
            {'label': 'Tesla', 'value': 'TSLA'},
            {'label': 'Apple', 'value': 'AAPL'},
            {'label': 'Coke', 'value': 'COKE'}
        ],
        value='TSLA'
    ),
    dcc.Graph(id='my-graph')
], className="container")


@app.callback(Output('my-graph', 'figure'),
              [Input('my-dropdown', 'value')])


def update_graph(selected_dropdown_value):
    print("test")
    dff = df[df['Stock'] == selected_dropdown_value]
    return {
        'data': [{
            'x': dff.Date,
            'y': dff.Close,
            'line': {
                'width': 3,
                'shape': 'spline'
            }
        }],
        'layout': {
            'margin': {
                'l': 30,
                'r': 20,
                'b': 30,
                't': 20
            }
        }
    }


if name == 'main':
    app.run_server(host='0.0.0.0')

There are two important things to note here, where this code differs from the Plotly Dash example:

  1. The Dash class must be instantiated with a url_base_pathname. This should always be /_tunnel_/8050/ e.g. app = dash.Dash('app', server=server, url_base_pathname='/_tunnel_/8050/').

  2. When you run the server, it must be bound to 0.0.0.0, e.g., app.run_server(host='0.0.0.0').

Run server from the terminal

$ python3 app.py
 * Serving Flask app "app" (lazy loading)
 * Environment: production
    WARNING: Do not use the development server in a production environment.
    Use a production WSGI server instead.
 * Debug mode: off
 * Running on http://0.0.0.0:8050/ (Press CTRL+C to quit)

Running streamlit apps

Similar to Dash apps, streamlit apps can also be developed on JupyterLab and accessed via the /_tunnel_/ endpoint.

Jupyter Lab Version

Streamlit is known to work with JupyterLab: 3.1.13, Python 3.9 - add Streamlit (installed). You may run into issues attempting to run streamlit with other versions of JupyterLab.

Install dependencies

In the terminal, install the streamlit dependencies:

pip install --user streamlit==1.36.0  # The streamlit package

Try streamlit hello in your terminal, if you get error like TypeError: bases must be types, then run the following commands to fix it:

pip uninstall protobuf
pip install protobuf==3.20.1

Next, set the following environment variables:

export STREAMLIT_SERVER_PORT=8050
export STREAMLIT_SERVER_ADDRESS=0.0.0.0
export STREAMLIT_SERVER_BASE_URL_PATH=/tunnel/8050/
export STREAMLIT_LOGGER_LEVEL=debug

You can use a config.toml file to set variables at runtime if you wish.

  1. First create the .streamlit/config.toml in your project root directory if it doesn’t already exist

  2. Next add the following to the file:

    [server]
address = '0.0.0.0'
port = 8050
baseUrlPath = '/_tunnel_/8050/'

Example code

The following code comes from streamlits own website.

N.B. You will need to have pandas and numpy installed for this code to work.

Create a file called app.py and add the following code:

import streamlit as st
import pandas as pd
import numpy as np


st.title('Uber pickups in NYC')


DATE_COLUMN = 'date/time'
DATA_URL = ('https://s3-us-west-2.amazonaws.com/'
            'streamlit-demo-data/uber-raw-data-sep14.csv.gz')


@st.cache_data
def load_data(nrows):
    data = pd.read_csv(DATA_URL, nrows=nrows)
    lowercase = lambda x: str(x).lower()
    data.rename(lowercase, axis='columns', inplace=True)
    data[DATE_COLUMN] = pd.to_datetime(data[DATE_COLUMN])
    return data


data_load_state = st.text('Loading data...')
data = load_data(10000)
data_load_state.text("Done! (using st.cache_data)")


if st.checkbox('Show raw data'):
    st.subheader('Raw data')
    st.write(data)


st.subheader('Number of pickups by hour')
hist_values = np.histogram(data[DATE_COLUMN].dt.hour, bins=24, range=(0,24))[0]
st.bar_chart(hist_values)


# Some number in the range 0-23
hour_to_filter = st.slider('hour', 0, 23, 17)
filtered_data = data[data[DATE_COLUMN].dt.hour == hour_to_filter]


st.subheader('Map of all pickups at %s:00' % hour_to_filter)
st.map(filtered_data)

Run server from the terminal

$ streamlit run app.py

Accessing your app

Access via _tunnel_ URL

Copy your jupyter URL and append /_tunnel_/8050/ to access your running app. - If your jupyter URL is https://r4vi-jupyter-lab.tools.alpha.mojanalytics.xyz/lab?, then your app will be available at https://r4vi-jupyter-lab.tools.alpha.mojanalytics.xyz/_tunnel_/8050/. - If your jupyter URL is https://[GITHUB USERNAME]-jupyter-lab.tools.analytical-platform.service.justice.gov.uk then your app will be available at https://[GITHUB USERNAME]-jupyter-lab.tools.analytical-platform.service.justice.gov.uk/tunnel/8050/

Who can access the _tunnel_ URL?

Only you can access the URL and it can not be shared with other members of your team. It is intended for testing while developing an application.

Troubleshooting

This feature has been introduced in the v0.6.5 jupyter-lab helm chart. If following this guide doesn’t work for you it is likely that you’re on an older version. Contact us on the #analytical-platform-support Slack channel. Alternatively, contact us by email to request an upgrade.

This page was last reviewed on 6 July 2022. It needs to be reviewed again on 6 October 2022 by the page owner #analytical-platform-support .
This page was set to be reviewed before 6 October 2022 by the page owner #analytical-platform-support. This might mean the content is out of date.